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Plot copy number segments from CNAqc

Usage

plot_segments_tick_tack_CN(
  cnaqc_x,
  K = K,
  max_alleles = 6,
  chromosomes = paste0("chr", c(1:22))
)

Arguments

cnaqc_x

A CNAqc object containing CNA data.

K

Numeric, number of clusters.

max_alleles

Numeric, maximum number of alleles to plot (default: 6).

chromosomes

A character vector specifying which chromosomes to plot.

Value

A ggplot object showing CNA segments.