Reference

Fitting functions These functions are used to fit a variational Binomial mixture model and refine its clustering assignments.
variational_fit()	Variational fit for Binomial mixtures
choose_clusters()	Filter clusters heuristic
rename_clusters()	Rename VIBER clusters.
Annotation functions These functions extract derived objects, like clone trees, from a VIBER fit.
get_clone_trees()	Return clone trees from the fit.
Plotting functions These functions can be used to plot data, fits and clusters from a VIBER object.
plot_1D()	Plot the clustering assignments for marginal data.
plot_2D()	2D clusters plot.
plot_ELBO()	Plot the ELBO
plot_fits()	Plot 2D and 1D fits altogether.
plot_latent_variables()	Plot the latent variables of the mixture.
plot_mixing_proportions()	Plot the mixing proportions of the mixture.
plot_peaks()	Plot the Binomial peaks of the mixture.
S3 functions The S3 class vb_bmm returned by variational_fit implements the following S3 methods.
plot(<vb_bmm>)	Plot the clustering assignments.
print(<vb_bmm>)	Print to screen the object
summary(<vb_bmm>)	Print to screen the object
Datasets Example datasets shipped with the package.
mvbmm_example	Example data
fit_mvbmm_example	Fit of the attached multivariate Binomial mixture