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Setting the germline subject

Source: R/RcppExports.R
MutationEngine-cash-set_germline_subject.Rd

This method sets the germline subject.

Value

Set the germline subject.

Details

The subject must be one among those reported by MutationEngine$get_germline_subjects().

See also

MutationEngine$get_germline_subjects() to get the available germline subjects; MutationEngine$get_active_germline() to get the active germline subject.

Examples

# build a mutation engine
m_engine <- MutationEngine(setup_code = "demo")
#> 
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 [████████████████████████████████████████] 100% [00m:00s] Context index loaded                            

#> 
 [█---------------------------------------] 0% [00m:00s] Loading RS index                                  

 [████████████████------------------------] 38% [00m:01s] Loading RS index                                 

 [██████████████████████████████----------] 74% [00m:02s] Loading RS index                                 

 [████████████████████████████████████████] 100% [00m:02s] RS index loaded                                 

#> 
 [█---------------------------------------] 0% [00m:00s] Loading germline                                  

 [████████████████████████████████████████] 100% [00m:00s] Germline loaded                                 


# set the active germline subject dataframe
m_engine$set_germline_subject("NA18941")
#> 
 [█---------------------------------------] 0% [00m:00s] Loading germline                                  

 [████████████████████████████████████████] 100% [00m:00s] Germline loaded