This method returns information about the genome.
Details
This method returns a data frame reporting the name
(column "name"), the size (column "size"), and the number
of alleles (column "num_of_alleles") of each chromosome.
Examples
# build a mutation engine
m_engine <- MutationEngine(setup_code = "demo")
#>
[█---------------------------------------] 0% [00m:00s] Loading context index
[████████████████████████████████████████] 100% [00m:00s] Context index loaded
#>
[█---------------------------------------] 0% [00m:00s] Loading RS index
[██████████------------------------------] 23% [00m:01s] Loading RS index
[████████████████████--------------------] 48% [00m:02s] Loading RS index
[█████████████████████████████-----------] 70% [00m:03s] Loading RS index
[██████████████████████████████████████--] 93% [00m:04s] Loading RS index
[████████████████████████████████████████] 100% [00m:04s] RS index loaded
#>
[█---------------------------------------] 0% [00m:00s] Loading germline
[████████████████████████████████████████] 100% [00m:00s] Germline loaded
# get the genome information
m_engine$get_genome_info()
#> chr size num_of_alleles
#> 1 22 51304566 2