Getting the CNA allele — CNA$get

This method returns the identifier of the allele in which the CNA is occurs.

Value

The allele in which CNA occurs.

Details

If the CNA is an amplification corresponds to the new allele identifier. If, instead, the CNA is a deletion is the identifier of the allele on which the deletion occurs.

Examples

# create an amplification CNA
cna <- Amplification("X", 20002, 100, 1, 0)

# get the allele in which `cna` occurs (i.e., 1)
cna$get_allele()
#> [1] 1