DRAGEN VCF small variants parsing function

Source: R/parsers.R

Parse a small variants VCF file from DRAGEN with information about SNVs and indels

load_VCF_smallVar_DRAGEN(file)

Arguments

file

is DRAGEN small variants vcf file path

Value

Allele depths for normal and tumour for all PASS autosome SNVs

Examples

# not run
if (FALSE) {
 load_VCF_smallVar_DRAGEN("Myfile.vcf")
}