Get classification data for specific selected model.
Examples
# First load example classified data
data(MSK_classified)
# Get classification results
classification(MSK_classified)
#> # A tibble: 176,073 × 19
#> sample tumor_type purity chr from to ref alt DP NV VAF
#> <chr> <chr> <dbl> <chr> <dbl> <dbl> <chr> <chr> <int> <int> <dbl>
#> 1 P-002891… CHOL 0.3 chr17 7.58e6 7.58e6 G A 837 133 0.159
#> 2 P-002891… CHOL 0.3 chrX 5.32e7 5.32e7 G A 832 85 0.102
#> 3 P-000369… BLCA 0.2 chr17 7.58e6 7.58e6 C A 437 109 0.249
#> 4 P-000369… BLCA 0.2 chr5 1.49e8 1.49e8 C T 360 36 0.1
#> 5 P-000369… BLCA 0.2 chr13 3.29e7 3.29e7 G C 1027 162 0.158
#> 6 P-000369… BLCA 0.2 chr13 3.29e7 3.29e7 G C 1021 182 0.178
#> 7 P-000369… BLCA 0.2 chr19 1.11e7 1.11e7 G T 573 98 0.171
#> 8 P-000369… BLCA 0.2 chr22 4.15e7 4.15e7 G A 416 45 0.108
#> 9 P-000369… BLCA 0.2 chrX 4.49e7 4.49e7 C T 730 194 0.266
#> 10 P-000382… BLCA 0.6 chr5 1.30e6 1.30e6 G A 218 138 0.633
#> # ℹ 176,063 more rows
#> # ℹ 8 more variables: gene <chr>, HGVSp_Short <chr>, gene_role <chr>, id <chr>,
#> # label <chr>, state <chr>, posterior <dbl>, entropy <dbl>