Get exposures — get_exposure • bascule

Get exposures

Usage

get_exposure(
  x,
  types = get_types(x),
  samples = get_samples(x),
  clusters = get_cluster_labels(x),
  add_groups = FALSE,
  matrix = FALSE
)

Arguments

x: bascule object.
types: List of variant types to retrieve signames for.
samples: List of samples to report exposures for.
clusters: List of cluster labels to report exposures for.
add_groups: Logical. If `TRUE` it will add a column with the sample's group label.
matrix: Logical. If `TRUE`, it will return the signatures in wide format.

Value

Exposures matrix in long or wide format names with names equal to `types`.