Get tumourevo driver annotation paths
Usage
get_tumourevo_driver(spn, coverage, purity, vcf_caller, cna_caller, sample)
Arguments
- spn
SPN identifier, e.g. "SPN01".
- coverage
Sequencing coverage (integer).
- purity
Sample purity (0–1).
- vcf_caller
VCF caller: "mutect2" or "strelka".
- cna_caller
CNA caller: "ascat" or "sequenza".
- sample
Sample name.
Value
Character vector of paths to driver RDS files.
Examples
if (FALSE) { # \dontrun{
get_tumourevo_driver("SPN01", 100, 0.9, "mutect2", "ascat", "SPN01_1")
} # }
