Get SCOUT sample metadata — get

Returns a tibble with one row per sample, containing identifiers and high-level annotations (tumour type, clonal composition, FGA/FGS, clonal class, hypermutant status, WGD, and signature context).

Usage

get_metadata()

Value

A tibble with columns: SPN, Sample, FGA, FGS, Clonal Class, Clonal Subclass, Tumour type, Sample type, Hypermutant Sample, Hypermutant SPN, WGD, Signature Context, Signature Class.

Examples

if (FALSE) { # \dontrun{
get_metadata()
} # }